PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027097243.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 369aa MW: 41866.8 Da PI: 4.6616

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027097243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77.1	4.2e-24	16	114	35	128
NAM 35 kevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.....tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWv 122 ++ +i++++P++Lp vk++ + +fF+++ k+y+tg+rk+r+ + +W++tg++k+v+ + ++g+kk++v+y r k+ekt+Wv XP_027097243.1 16 EDDGICYTHPQNLP-GVKQDGSVAHFFHRAIKAYNTGTRKRRKilgdsSGDVRWHKTGRTKAVHL-DCIQKGCKKIMVLYlsPVRGGKPEKTNWV 108 3447********.677888899**************75665545778********.9999******7634777777* PP NAM 123 mheyrl 128 mh+y+l XP_027097243.1 109 MHQYHL 114 **98 PP

Sequence ? help Back to Top
Protein Sequence Length: 369 aa Download sequence
MKPHPFIEEF IPTVNEDDGI CYTHPQNLPG VKQDGSVAHF FHRAIKAYNT GTRKRRKILG 60 DSSGDVRWHK TGRTKAVHLD CIQKGCKKIM VLYLSPVRGG KPEKTNWVMH QYHLGTEEDE 120 REGEYVISKV FYQQQQVKQN EKAEVEVPED DASIVKVDPV TPKSVTPEPP RTESRFPDCD 180 AQESVLPAAQ HHGVVCMEDE VRPPSDQPNC EDPVSAVDLA DQQDDKTDND AGEKREWWDS 240 ESQYLLDSQQ LVEALSLCDE FLRSQSPNRD GDKNEQELKP KPRLADYAHL GPEHLKKDLE 300 ECQDLVLDPV NLELDTPPDF RLSQLVSSSL LSLLHIIILM VYFILEFASQ DSFISWGGNK 360 SADIEEHGT

Sequence ? help Back to Top

Protein Sequence Length: 369 aa Download sequence

MKPHPFIEEF IPTVNEDDGI CYTHPQNLPG VKQDGSVAHF FHRAIKAYNT GTRKRRKILG  60
DSSGDVRWHK TGRTKAVHLD CIQKGCKKIM VLYLSPVRGG KPEKTNWVMH QYHLGTEEDE  120
REGEYVISKV FYQQQQVKQN EKAEVEVPED DASIVKVDPV TPKSVTPEPP RTESRFPDCD  180
AQESVLPAAQ HHGVVCMEDE VRPPSDQPNC EDPVSAVDLA DQQDDKTDND AGEKREWWDS  240
ESQYLLDSQQ LVEALSLCDE FLRSQSPNRD GDKNEQELKP KPRLADYAHL GPEHLKKDLE  300
ECQDLVLDPV NLELDTPPDF RLSQLVSSSL LSLLHIIILM VYFILEFASQ DSFISWGGNK  360
SADIEEHGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25580.1	1e-129	NAC family protein