PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027098656.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 157aa MW: 18581.4 Da PI: 9.9887

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027098656.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	83.8	3.6e-26	1	130	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevlskkg 97 +rF+Ptdeel+ +yL+ + + +++ + +i++ ++y++ P L+ + + ++++++yfF++ + k ++ +++ + + gyWkat + ++++ ++ XP_027098656.1 1 MRFRPTDEELIRDYLRLRFWDLPITPAGIINDENVYNYPPDLLRkRWCGHDDRRMYFFTNLEMKDKSIINARHsVGEVGYWKATQAQAKITK-NH 94 69*******************999899**********944566678899****999877777756779*********9.99 PP NAM 98 elvglkktLvfy.....kgrapkgektdWvmheyrl 128 + g+k+ L +y k+ ++ g+k +W+m+ey+l XP_027098656.1 95 PTLGTKTPLSYYkfvldKNGKKVGRKQNWLMQEYTL 130 99******887776788899********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 157 aa Download sequence
MRFRPTDEEL IRDYLRLRFW DLPITPAGII NDENVYNYPP DLLRKRWCGH DDRRMYFFTN 60 LEMKDKSIIN ARHSVGEVGY WKATQAQAKI TKNHPTLGTK TPLSYYKFVL DKNGKKVGRK 120 QNWLMQEYTL PDNRSLDGEL VLCVVYSHEK GKKKLPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33480.1	6e-17	NAC family protein