PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027099031.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family WRKY
Protein Properties Length: 155aa    MW: 17003.1 Da    PI: 6.9176
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027099031.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY438.8e-1422642059
                    S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY 20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
                     ++sY rCt++   +Cp+kk+v+r ++dp+++e+t++g+H+++
  XP_027099031.1 22 ISKSYLRCTHQklyQCPTKKQVQRLDDDPNIFEVTNRGDHTCH 64
                    579********9999**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MKIGGAQLVN TIEFVKLLDC VISKSYLRCT HQKLYQCPTK KQVQRLDDDP NIFEVTNRGD  60
HTCHLSSTTL SVLPPLPVER REAHRSTSST VNMGSSTSGG AIAGPSTSRY GRDVDYPVVD  120
MADVMFNSGS SSSTSIDLIF SSMDDKWPDL GDKKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.12e-22WRKY family protein