PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027099146.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 134aa    MW: 15021.2 Da    PI: 9.9052
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027099146.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.62.7e-1571253110
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev..diykvePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                      GfrF+Pt+ee++   L  k+++++ ++++v++e   d  ++ Pw+L                k +++  y F+k +k +a+  r+ +++   +W
  XP_027099146.1   7 IGFRFRPTEEEII-TLLWLKASNQQKHTTDVVPEKilDGADASPWKLFGaddlrwqlcddsGKKRTKRMAYVFTKLSKMSAN--RTAKTAGCRTW 98 
                     7************.6666666666666667755543899********63478889887764222233466****99998775..7888777789* PP

             NAM  84 katgkdkevlskkgelvglkktLvfyk 110
                     + + k +++ +++ge +gl+k+L +  
  XP_027099146.1  99 EGQAKAQDIPNSRGEIIGLRKMLSYVL 125
                     ************************984 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MDRDCLIGFR FRPTEEEIIT LLWLKASNQQ KHTTDVVPEK ILDGADASPW KLFGADDLRW  60
QLCDDSGKKR TKRMAYVFTK LSKMSANRTA KTAGCRTWEG QAKAQDIPNS RGEIIGLRKM  120
LSYVLNSGSP QGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.13e-07NAC family protein