PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027099168.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 199aa    MW: 22396.6 Da    PI: 8.9326
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027099168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.37.7e-2061422128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv..ePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgy 82 
                     p Gf+F+Pt+ee+++  L  k ++++ ++++v++e  +y +   Pw+L                k +++  y F+k +k +a  +r+ r++  g+
  XP_027099168.1   6 PIGFHFRPTEEEIITL-LWLKDTNQQKHITDVFPEKILYGAdaSPWKLFGddnvrlelcddsGKKRTKRMAYVFTKLSKMSA--NRTARTAGCGT 97 
                     89************54.555545555566688888777754238****6346788888776422223346699*99999876..5********** PP

             NAM  83 WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     W+ + k + + +++ge +gl+k+L +   ++ +++   W+mhey+l
  XP_027099168.1  98 WEGQAKAQYIPNSRGEIIGLRKMLSYVL-NSGSPQGGGWIMHEYSL 142
                     **************************94.45555789*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MDRDCPIGFH FRPTEEEIIT LLWLKDTNQQ KHITDVFPEK ILYGADASPW KLFGDDNVRL  60
ELCDDSGKKR TKRMAYVFTK LSKMSANRTA RTAGCGTWEG QAKAQYIPNS RGEIIGLRKM  120
LSYVLNSGSP QGGGWIMHEY SLAGSLLDRI GPTDYVVCRI TIDDEKYIEV KKVAEAKQGV  180
NQSGSMRCTE NPKVLGKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.12e-15NAC family protein