PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027099265.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 159aa    MW: 17997.3 Da    PI: 6.7889
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027099265.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM61.72.4e-1971433128
             NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk..vePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                      G+rF+P++eel+ + L+ kv++ +++  + +ke ++y   + Pw+  +              +++++ +y F++ +k +a  k++ r++ sg+W
  XP_027099265.1   7 IGCRFRPSEEELL-YLLRDKVTNPRFQY-DQVKEKKLYGegASPWNVFSdddlqrelfddnGSNGNKRMVYVFTELNKLSA--KKAARTAGSGTW 97 
                     7************.9999*******999.77999998862269***96346777888776433334556799999988765..6999*99***** PP

             NAM  84 katgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         k +++ +  +ge++g +k+L +   + ++ +k +W+mhey++
  XP_027099265.1  98 DGEAKITTIQDMiTGEQIGKRKMLSYVLHSGSEVKKGRWIMHEYAF 143
                     ***9999999888999***********99999999*********75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    
MVEDYAIGCR FRPSEEELLY LLRDKVTNPR FQYDQVKEKK LYGEGASPWN VFSDDDLQRE  60
LFDDNGSNGN KRMVYVFTEL NKLSAKKAAR TAGSGTWDGE AKITTIQDMI TGEQIGKRKM  120
LSYVLHSGSE VKKGRWIMHE YAFAGACLNG IGSSIHNTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.19e-12NAC family protein