PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027099572.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 266aa    MW: 30475.8 Da    PI: 5.9525
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027099572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.63.5e-101213555
         G2-like 35 lmkvkgLtlehvkSHLQkYRl 55
                    +m+v gLt++hvkSHLQ+YR+
  XP_027099572.1  1 MMDVRGLTISHVKSHLQMYRS 21
                    7*******************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MMDVRGLTIS HVKSHLQMYR SMKNDVARQA ADRNITIEPR KQQSVQDLHE GGVEQENNMV  60
YLHPFSDSQF IYNPPPTKRA RIEKMSSISE KLQRCQRIRE SVTYDPYGDD DYGQTTAEKS  120
GMIKEKEEGR RDFRWWQQTH ETATPIHIPF SLPQDFFQTL NPSSNAGPME ESHPFFKVAN  180
QEEVKFEPSK TAKSQNLIEK HYVQEETDDC GLSLSLSLHH PSTQISNVSS TSEISEAISS  240
YSRNFNDCSG SYLVQHTVNL DLSIAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.11e-06G2-like family protein