PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027101318.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 233aa    MW: 25511.6 Da    PI: 5.3857
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027101318.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.7e-1865115155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+G+r++  +g+Wv+e+r+p   +k+ r++lg+f tae+Aa+a++ a+ +l+g
  XP_027101318.1  65 PVYRGIRRRN-SGKWVCEVREP---NKKSRIWLGTFPTAEMAARAHDVAAIALRG 115
                     68*****888.8******9998...347*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
MNHFSTCYSD PIPNPSSPDF PDSSSTSDNV VNACKANYSD EEVLLASNNP KKRAGRKKFR  60
ETRHPVYRGI RRRNSGKWVC EVREPNKKSR IWLGTFPTAE MAARAHDVAA IALRGRSACL  120
NFADSAWRLP VPESPEPKHI QKAAAEAAEA FRPSESCDGV SSGASGDHAN KEECGSVAFP  180
ENVFFMDEEA VFGMPGLIAN MAEGLMLPPP QCAVGDDLEL EANADMFLWS YSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.13e-76ERF family protein