PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027101672.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 179aa MW: 20325.4 Da PI: 9.7095

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027101672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.4	4.9e-31	18	71	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLHe+F+eave+LGG++kAtPk i+++m+v gL ++hvkSHLQ+YR XP_027101672.1 18 PRLRWTPELHEHFIEAVEHLGGKHKATPKGIVQMMGVSGLQVSHVKSHLQMYRN 71 8****************************************************5 PP
2	Myb_DNA-binding	50	6.7e-16	19	70	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +++av+ lGg+ t+k I ++mg g+ ++ks++q+y+ XP_027101672.1 19 RLRWTPELHEHFIEAVEHLGGKhkaTPKGIVQMMGvSGLQVSHVKSHLQMYR 70 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MEMCNRTGVR KYKKSAFPRL RWTPELHEHF IEAVEHLGGK HKATPKGIVQ MMGVSGLQVS 60 HVKSHLQMYR NMKKRATINL VVPMKLHEEE TPDAVVWSLT RKVGKDQEGP PKERKEPESS 120 ITCKSRGKNE TINQGDPLLN FQVIQGDTSC FYASKESENG IFDFLQSIAE CGKKGNLWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-25	G2-like family protein