PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027101755.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 228aa    MW: 25366 Da    PI: 9.2467
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027101755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.22.9e-313184255
         G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    prlrWtpeLHe+Fveav+qLGG+++AtPk+i ++m+v gL ++hvkSHLQ+YR+
  XP_027101755.1 31 PRLRWTPELHEHFVEAVDQLGGKHQATPKRIIQMMGVRGLQVSHVKSHLQMYRS 84
                    8****************************************************7 PP
2Myb_DNA-binding53.55.6e-173283148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT+e++e +v+av qlGg+   t+k+I ++mg  g+   ++ks++q+y+
   XP_027101755.1 32 RLRWTPELHEHFVEAVDQLGGKhqaTPKRIIQMMGvRGLQVSHVKSHLQMYR 83
                     89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MLGIPDRPIN LPNMERCNKT GVRQYKKSAC PRLRWTPELH EHFVEAVDQL GGKHQATPKR  60
IIQMMGVRGL QVSHVKSHLQ MYRSMKKSTT INLVVPAMLH EKETPDSVVL SPLSKVGKDQ  120
EPPLKRKESG SSITCKGKTK TINQGDPLFD SQVIQGSTNC NTLTESQTGI FDFLQAIVEC  180
GKEPSLWSSN GRLVSQSSAS SNSFDLLPYS SKDSHVNLDL SISPCYHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.16e-26G2-like family protein