PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027101805.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 190aa MW: 21888 Da PI: 10.5755

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027101805.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151.8	3.1e-47	19	147	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 pGfrFhPtdeelv +yL++kve+k l++ e i++vdiyk++PwdLp kv ++ +fF+ r +ky+++ r+nr+t s +Wkatg dk+++s+ XP_027101805.1 19 LPGFRFHPTDEELVGFYLRRKVERKXLRI-ELISQVDIYKCDPWDLPlPKVGVVGTRNFFFCMRGRKYRNSVRPNRVTGSXFWKATGIDKPIYSS 112 69*************************.89**********965777788899********************************8 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkk+Lv+y+g+a kg+ktdW+mhe+rl XP_027101805.1 113 geTTQCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 147 555566*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 190 aa Download sequence
MEEFKSSNKN HKDDDGVVLP GFRFHPTDEE LVGFYLRRKV ERKXLRIELI SQVDIYKCDP 60 WDLPLPKVGV VGTRNFFFCM RGRKYRNSVR PNRVTGSXFW KATGIDKPIY SSGETTQCIG 120 LKKSLVYYRG SAGKGTKTDW MMHEFRLPPV GLIQLQPNLI QGIILLRKLM IGRFAESSKG 180 MHRPKGINQT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	2e-72	NAC family protein