PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027101846.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family E2F/DP
Protein Properties Length: 124aa    MW: 14119.3 Da    PI: 8.3112
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027101846.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP44.13.4e-1466118158
         E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnl 58 
                     rkeksL +l+++flk ++k   + + ++++a +L    v  +rRRiYDi+N+ e++++
  XP_027101846.1  66 RKEKSLSVLCSNFLKQYNKDGVDSIGVDHAAFQL---GV--ERRRIYDIVNIPESVGV 118
                     79*****************999************...**..***********999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MNSERLPAIE LIISLFLFNF SVSYLYICVY LLLNLDSMTA CIRRKGMWSS HASRDSESKN  60
PPFYCRKEKS LSVLCSNFLK QYNKDGVDSI GVDHAAFQLG VERRRIYDIV NIPESVGVST  120
LEGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01330.14e-24E2F/DP family protein