PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027102415.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 200aa    MW: 22145.6 Da    PI: 8.7277
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027102415.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.64.8e-21102154156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++y+GVr+++ +g+++AeIrdp++     r++lg++gt+eeAa a+++a+ +++g+
  XP_027102415.1 102 TRYRGVRRRP-WGKFAAEIRDPRKK--GSRIWLGTYGTPEEAAMAYDRAAFEIRGA 154
                     68********.**********9653..3*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MHSEAMSNTD LALLDSIHQQ LLNDSLFSDI FPSFSHDATI DDFKSNTSFN NSPLAESCGQ  60
TLPNMDNSHR TTTDGLVNID EQEEDRNGSA AARGKNASAE WTRYRGVRRR PWGKFAAEIR  120
DPRKKGSRIW LGTYGTPEEA AMAYDRAAFE IRGARAVLNF PHLIGSNMCS TPQTVSPKRR  180
SPEPSTSSSP KKRKLANASI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178194KRRSPEPSTSSSPKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-36ERF family protein