PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027102676.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 301aa    MW: 34096.2 Da    PI: 9.1804
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027102676.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM172.71.1e-5371341128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+++yLk+kv++ +++l ++i+e+d+yk++PwdLp k+  +e+ew+fFs+rd+ky++g r+nr+++sgyWkatg+dk++ls 
  XP_027102676.1   7 LPPGFRFHPTDEELINYYLKNKVSSATNPLVSIIAEIDLYKFNPWDLPDKALFGESEWFFFSPRDRKYPNGARPNRSAASGYWKATGTDKPILSY 101
                     79****************************999***************7777899**************************************** PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++ +g+kk Lvfykgrap+g+kt+W+mheyrl
  XP_027102676.1 102 ASQCIGVKKALVFYKGRAPNGTKTNWMMHEYRL 134
                     *******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MEGINVLPPG FRFHPTDEEL INYYLKNKVS SATNPLVSII AEIDLYKFNP WDLPDKALFG  60
ESEWFFFSPR DRKYPNGARP NRSAASGYWK ATGTDKPILS YASQCIGVKK ALVFYKGRAP  120
NGTKTNWMMH EYRLLNDSHH SLVQKGSMRL DDWVLCRVRQ KSNNSIEPRE GNAKSRSKRT  180
FPCGFDAYGE GEIAQNISYF GNNHWHPQQN SDRLIPYGHL DIQGGTSSDQ SSSQENFEPS  240
QVNINMNHSM KDALESIKRV LSLGNLDEQG SKLPNKRLRS SLTPSSTYLE NSGIFVIPNN  300
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.14e-75NAC family protein