PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027102759.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family B3
Protein Properties Length: 188aa    MW: 20970.1 Da    PI: 7.1132
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027102759.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.25.4e-1735125199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+k +++s+v k  +l+lp+ f++ h  +   ++t++lede+ +++  k+    ++++  l++GW +F+ a++L egD++vF+++     +l+v 
  XP_027102759.1  35 FVKPMIRSNVKKGFWLSLPRLFCKLHLPD--HDTTIVLEDENRKEYITKY--LAQRRG--LSAGWMGFAIAHKLVEGDVLVFHMVI--ANKLKVY 121
                     89*********************999433..5679***************..666655..9**********************764..4456888 PP

                     EE-S CS
              B3  96 vfrk 99 
                     ++r+
  XP_027102759.1 122 IIRS 125
                     8876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MVGMHDLCGQ IKVTSSVMQR AEAVQETLDA KFPSFVKPMI RSNVKKGFWL SLPRLFCKLH  60
LPDHDTTIVL EDENRKEYIT KYLAQRRGLS AGWMGFAIAH KLVEGDVLVF HMVIANKLKV  120
YIIRSSRLAE VDAALCLLQL EGPATGNESG HRGDDCRDPQ PTGEKSKSSS QPESENISDK  180
DMLDNNLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.15e-39B3 family protein