PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027102819.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 197aa    MW: 22019.7 Da    PI: 7.5047
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027102819.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.8e-1999151156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++y+GVr+++ +g+++AeIr p++ g   r++lg++ tae+Aa a++ a+ +++g+
  XP_027102819.1  99 PRYRGVRRRP-WGKFAAEIRNPKKKG--SRIWLGTYETAEDAAMAYDLAAFEIRGA 151
                     68********.**********96643..*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MHPETISNSD LALLDSVHQQ LLDDSLFSDI FPASSFFDGT IYGYNPNSSC EASLLAQSCG  60
EIFDNPPSTT TDNLVKIDQV EQRMEFELPR GKPASVEWPR YRGVRRRPWG KFAAEIRNPK  120
KKGSRIWLGT YETAEDAAMA YDLAAFEIRG ARALLNFPHL VGSNMYSTPQ RVSPRSRPSE  180
TSTSSSPKKR KLDNGSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.19e-27ERF family protein