PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027102820.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 204aa    MW: 22789.4 Da    PI: 6.6826
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027102820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-18106157256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g ++AeIrdp++ g   r++lg++ t+e+Aa a ++a+ k++g+
  XP_027102820.1 106 RYRGVRRRP-WGTYAAEIRDPKKKG--SRIWLGTYETPEDAALAFDQAAFKMRGA 157
                     7********.**********96643..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MFGTTTPDSE LALLASIEHH LLNDTDLSDI FPELYSFNDA EVFNSSPSHG GSRDSGEVAL  60
NNCEMNSASE DIPFKFGLLG QDEVEQNITA AEVAAPAENV SKDWRRYRGV RRRPWGTYAA  120
EIRDPKKKGS RIWLGTYETP EDAALAFDQA AFKMRGARAR VNFPHLIGSN NVEPARVNPR  180
RRVLEPSIIP SSSTPQKKCK FQRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-37ERF family protein