PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027102821.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 199aa    MW: 21839.7 Da    PI: 8.7383
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027102821.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-1994146156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++y+GVr++  +g+++AeIrdp++ g   +++lg++ t+e+Aa a+++a+ +++g+
  XP_027102821.1  94 TRYRGVRRRA-WGKFAAEIRDPKKKG--SKIWLGTYETPEDAALAYDQAAFEMRGA 146
                     68*****777.**********96643..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MDSDLALLSF FENHLLNDPD FQDIISEINC YDPLICNPST SFGSFHSCGS GIEMISNTST  60
SNNSSETAGV GSAVRGGQPK ASTARGRQAA VDWTRYRGVR RRAWGKFAAE IRDPKKKGSK  120
IWLGTYETPE DAALAYDQAA FEMRGAKARL NFPNLFGSNT LQPVRVNPRK RSLEPSVLCC  180
STEIDVSKKG KFVVSSMMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.18e-44ERF family protein