PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027102824.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 207aa    MW: 23223.1 Da    PI: 5.3879
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027102824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-19102154156
             AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++y+GVr+++ +g+++AeIrd    + k  r++lg++ t+e+Aa a+++a+ +++g+
  XP_027102824.1 102 TRYRGVRRRP-WGKFAAEIRDL---KmKGSRIWLGTYETPEDAALAYDQAAFEMRGA 154
                     68********.**********4...3345**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MMQEATSMDS DLALLSFFEN HLLNDSDFQD IISEINSYDP PICNPSTSLG SSHLFGSGIE  60
MISNTSTSNN SSETEGILDQ LYEEVNQKPV PARGRQAPVE WTRYRGVRRR PWGKFAAEIR  120
DLKMKGSRIW LGTYETPEDA ALAYDQAAFE MRGAKARLNF PNLFGSNTLQ PVRVNPRKRS  180
LEPSVSCCST EKDVPKKGKF EVSSMMI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-43ERF family protein