PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027102938.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 156aa    MW: 18452.8 Da    PI: 8.2981
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027102938.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.51e-082686148
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............t 48
                    kfYn+Y  ++GFsvrk++ +k  ++g +t+r++ C keg + + +++              +
  XP_027102938.1 26 KFYNKYVFRMGFSVRKDYLNKD-KDGVVTSRRYSCCKEGVKCKYEEHnhelhitqrahmmpS 86
                    6*****************9998.8999************99887776456665555544441 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MDCTKLAEDG IPELRMEFNN EEDTYKFYNK YVFRMGFSVR KDYLNKDKDG VVTSRRYSCC  60
KEGVKCKYEE HNHELHITQR AHMMPSQRKV SETQEFQTKI SEDAGLSLKQ SHELMGKEAG  120
GMENVGYTRE DLKRYLRTRR ERSLKYGEAG SMLNYF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-15FAR1 family protein