PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027103503.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 362aa MW: 40531.8 Da PI: 4.8892

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027103503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.1	6.1e-52	10	138	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp+G+rF+Ptdeel+++yL+ k++g + ++ ++i+evdi+k ePwdLp + +k+ ++ew+fF+++d+ky++g+r nrat +gyWkatgkd+++ XP_027103503.1 10 LPVGYRFRPTDEELIDHYLRLKINGLDKDV-SIIREVDICKKEPWDLPdlSPIKSYDNEWFFFCPKDRKYQNGQRLNRATMKGYWKATGKDRNIR 103 799**********************999.89**********96447888999********************************* PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++kg+++g+kktLvfy grap+g++t+Wv+heyr+ XP_027103503.1 104 ARKGTKIGMKKTLVFYIGRAPDGKRTNWVIHEYRA 138 *******************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MMTVLPVKQL PVGYRFRPTD EELIDHYLRL KINGLDKDVS IIREVDICKK EPWDLPDLSP 60 IKSYDNEWFF FCPKDRKYQN GQRLNRATMK GYWKATGKDR NIRARKGTKI GMKKTLVFYI 120 GRAPDGKRTN WVIHEYRATN KELDGTHPGQ GSFVLCRLFK KHELKQDETA DGSNLVEVET 180 IVPSPTTEKS PLEDGNSEAL IPVAGSQAEV HPSSAESCPA KGSDGAIVVN PLPTSWQNDC 240 SLSAEEKGQV IDPMCIQSDP DLIESLRDIF DDPIPEALDW KIFSPLHSQV QLELGSGYMC 300 NPVSNDINCD AKSMASQYGT NTYDVNKFLN SILVNSDEYS YEESCINAIS TVECGTPGIL 360 SL

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MMTVLPVKQL PVGYRFRPTD EELIDHYLRL KINGLDKDVS IIREVDICKK EPWDLPDLSP  60
IKSYDNEWFF FCPKDRKYQN GQRLNRATMK GYWKATGKDR NIRARKGTKI GMKKTLVFYI  120
GRAPDGKRTN WVIHEYRATN KELDGTHPGQ GSFVLCRLFK KHELKQDETA DGSNLVEVET  180
IVPSPTTEKS PLEDGNSEAL IPVAGSQAEV HPSSAESCPA KGSDGAIVVN PLPTSWQNDC  240
SLSAEEKGQV IDPMCIQSDP DLIESLRDIF DDPIPEALDW KIFSPLHSQV QLELGSGYMC  300
NPVSNDINCD AKSMASQYGT NTYDVNKFLN SILVNSDEYS YEESCINAIS TVECGTPGIL  360
SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	7e-90	NAC family protein