PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027103531.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Dof
Protein Properties Length: 303aa    MW: 33000.6 Da    PI: 8.5452
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027103531.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.39.6e-402687263
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    ke+al+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  XP_027103531.1 26 KEQALNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNVPVGGGSRKNKRSSS 87
                    7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGIGLAKPIE TPKPAAALEK KPRPQKEQAL NCPRCNSTNT KFCYYNNYSL TQPRYFCKTC  60
RRYWTEGGTL RNVPVGGGSR KNKRSSSSTT SVSSLPPASS SENKKLPDLS HLTGTAPGFP  120
QNPKTPEGQD LNLTYPPVRN YSASLSGLMQ LPNFNENKNL DPHLGNISSS ISHVPAAGLE  180
FLKSTSGIST GGFSSLLSMP LSDSNAIYSS SQQLPMQEFK PKLSFSLDGF DNNGTDYGSL  240
HGVQVAENNN NNNSSRLFLP YEELKPLSSV TCDQYNEHQQ NRGQEGESAP NGYWSGMLGG  300
DSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.17e-52Dof family protein