PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027103619.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 390aa    MW: 43142.7 Da    PI: 4.3202
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027103619.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.4e-20132181255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +g+W+AeIrdps+   r+r +lg+f+taeeAa  +++a+ kl+g
  XP_027103619.1 132 KFRGVRQRP-WGKWAAEIRDPST---RARLWLGTFDTAEEAAMVYDNAAIKLRG 181
                     89*******.**********976...5*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MVVRGFLCPV KYTEHRSLTK KLALKPKKSS ERSSIVPRTV RISVTDPDAT DSSSDEDELF  60
GRLRVKRYIS EIKIETAAVC QQNSNNVISA SSNALAPRHH PKKKTAEALQ AKQRPMKAKE  120
PPVPAAGGAV RKFRGVRQRP WGKWAAEIRD PSTRARLWLG TFDTAEEAAM VYDNAAIKLR  180
GPDALTNFVT PPAKEKPQVN VASTSCYESG EESHNLSSPT SVLRFRSSQS SEEAEPECRS  240
EGVEGPVPAD CTDEQTVQEE TDGEPWQEPV PEVAEECQGE TRDMIPDYSN EYMPMDVPFL  300
DNFFNFQSPE QITFDDTVPP SFSNDTFDLG LDVSFDDDLL PGFLDDTATA GAGFGEFNDS  360
FQDFGSVELN VDDYFQDMND FASADALLAV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-64ERF family protein