PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027104025.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 232aa    MW: 25416.1 Da    PI: 7.0608
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027104025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.39e-19139189255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+    +  r++lg+f+ta +Aaka++ a+ k++g
  XP_027104025.1 139 HYRGVRRRP-WGKYAAEIRDPVR---KgSRVWLGTFDTAMDAAKAYDSAAFKMRG 189
                     69*******.**********643...24*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MSADESTTLE LIRQHLLGDF TSNDTESFLN NLGLCFADVC NDDDHDKTTI SSGKPDPTTS  60
ESDSGSFISD PPKQPDTPVS RYPKLEPDFF EFETKPTILI DSISPKSPVS GSPYSENPFR  120
PASASGKSDP FGGVRDGGHY RGVRRRPWGK YAAEIRDPVR KGSRVWLGTF DTAMDAAKAY  180
DSAAFKMRGR KAILNFPLDA GKSSPPVNSR RKSRRESSGV AVDHGHRQVS ET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-32ERF family protein