PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027104026.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 316aa    MW: 35140.4 Da    PI: 8.2166
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027104026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.4e-20158208255
             AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp   + k  r++lg+f+ta eAaka+++a+ +l+g
  XP_027104026.1 158 HYRGVRQRP-WGKFAAEIRDP---NrKGSRVWLGTFDTAVEAAKAYDKAAFRLRG 208
                     8********.**********9...6566*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MASQTQITET SALELIKQHL LDDFAFMENY CASDDRLSQF SHLSTSQSNN SSDSDTSSFV  60
TSNASFSFAT SSSSSNINYM ELETKPNVVA LTTPNHPRQT ATSFSERKPV LNIAIPPPVK  120
KLLDFNKMNT SNTTTYEEPK AKAVEQKKVQ EGSGEKKHYR GVRQRPWGKF AAEIRDPNRK  180
GSRVWLGTFD TAVEAAKAYD KAAFRLRGSK AILNFPHEVE NNTLPERELA MTSGRKRARE  240
PDVVSEDIVK KEVKREEVSP ASVRKGEERG LPTDPLTPSS WTAVWDCGDV KGIFEIPPLS  300
PLSPHPSLGY SQLMVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51190.12e-36ERF family protein