PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027104260.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 355aa    MW: 38918.9 Da    PI: 4.3247
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027104260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.96.8e-2080130155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr+p   + r  r +lg+fgta eAa a+++a+++++g
  XP_027104260.1  80 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFGTAVEAALAYDEAARSMYG 130
                     56*****999.**********8...3.35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MALLDQVSSV ASVPMDYSRK RKSRRRDGTN NVADTLAKWK EYNDKLDSLD EEGKVVRKVP  60
AKGSKKGCMK GKGGPENARC NYRGVRQRTW GKWVAEIREP NRGSRLWLGT FGTAVEAALA  120
YDEAARSMYG PCARLNLPNY GPQQEASIES SSFPATSASD STTTSGLSEV CPPADRDAEP  180
NSNVKEEDGE GESRIQDTRP LTWVGAGSPM CTVKEEPKDG HMEALDMSIQ AEAPVKNETF  240
NSSDEPLDTL AWDEMFDIDE MLSTLNSGPT HGSGSQYELV GINGGQFLNG NMQPSEFLYQ  300
MQNPDAKVLG SCQNMEQTSQ GVDYGFDFLE PGREENSQFA LDDLGFFDLD ADLGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11823SRKRKS
21927RKRKSRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.19e-41ERF family protein