PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027105953.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 376aa MW: 40247.4 Da PI: 10.5532

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027105953.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.5	7e-14	298	350	5	57
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ el ++ + XP_027105953.1 298 RRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKELNEELQKKQVELMEMQK 350 5789999************************************9999998865 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MNMEDLLKNI WTAEETQVNA TVERNGTTPA GNLQRQGSLT LPRTLSQRTV DEVWKDLFSG 60 GAKDGSGGGS SNLVPREPTL GEMTLEEFLV RAGVVREDAQ PTGKASNGGF YAGLVQSGGI 120 DNGLNIGFQQ LARDQGVLGN QMAKSKNALS NPSNLILNGD GVRSSQQQQN QQPPLQPLFP 180 KQATVAFASS LPLGNSVQQI GNNAQLASPG PNASVVGMTT AASTVAQGGV APTGVMGIAG 240 LRGVTTAAAG GSPGNHLHSD VISKSSLDSP SLSPSPYAFN EAGRGRRSSS TLEKQVERRR 300 RRMIKNRESA ARSRARKQAY TLELEAEVAK LKELNEELQK KQVELMEMQK NQMLETMKMP 360 WGGKRRCLRR TLTGPW

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MNMEDLLKNI WTAEETQVNA TVERNGTTPA GNLQRQGSLT LPRTLSQRTV DEVWKDLFSG  60
GAKDGSGGGS SNLVPREPTL GEMTLEEFLV RAGVVREDAQ PTGKASNGGF YAGLVQSGGI  120
DNGLNIGFQQ LARDQGVLGN QMAKSKNALS NPSNLILNGD GVRSSQQQQN QQPPLQPLFP  180
KQATVAFASS LPLGNSVQQI GNNAQLASPG PNASVVGMTT AASTVAQGGV APTGVMGIAG  240
LRGVTTAAAG GSPGNHLHSD VISKSSLDSP SLSPSPYAFN EAGRGRRSSS TLEKQVERRR  300
RRMIKNRESA ARSRARKQAY TLELEAEVAK LKELNEELQK KQVELMEMQK NQMLETMKMP  360
WGGKRRCLRR TLTGPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G34000.1	2e-51	bZIP family protein