PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027105982.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NF-YB

Protein Properties

Length: 169aa MW: 18933.7 Da PI: 4.5767

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027105982.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	42.1	2.1e-13	32	124	7	94
NF-YB 7 flPianvsrimkkvlP...anakis..kdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 +lP + v r++k l a++ i+ ++a + e fi ++t+ a+d c++ +r+ in++d+l al ++ f ++v+pl++ l+++r+ + XP_027105982.1 32 ELPKTIVRRLVKDKLSqlsAESEITvfREALQAFSESGRIFIHYLTATANDICKESNRQIINAEDVLKALEEIDFPEFVQPLRASLEEFRQRN 124 57888889999976541115555543379999999*******************************************************865 PP

Sequence ? help Back to Top
Protein Sequence Length: 169 aa Download sequence
MAEKEKEKEK AKAKENGEVT TVTESAAGEL EELPKTIVRR LVKDKLSQLS AESEITVFRE 60 ALQAFSESGR IFIHYLTATA NDICKESNRQ IINAEDVLKA LEEIDFPEFV QPLRASLEEF 120 RQRNAGKRSG SXKAKEADRK GKRKEPPTAE VEDEQDATKS DESEDGADD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27470.1	4e-37	NF-YB family protein