PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027106368.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 364aa MW: 38160.7 Da PI: 9.4315

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027106368.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	46.9	6.2e-15	270	326	4	59
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevakl 59 +++rr++kNRe+A rsR+RK+a++ eLe v +Le+eN +L k+e+++ kk ++l XP_027106368.1 270 QQKQRRMIKNRESAARSRERKQAYTVELEALVTQLEEENARLlKEEADQKKKRFKQL 326 689************************************996266788888777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MASSKVMSST SPANPDLPRH STSTATTSST CSTSTTGLLQ HSSAVFHPPP PPHQQPQAHH 60 HLLHHSDDHS FGSMNMEEIL KNIYSDPDTL ASAVDGDGSL PAVGAGRNNN VGEVGSKTVD 120 EVWKEIVSGG GAAAGGGGGS HEPRMTLEDF LTKAGAVSEE DVRVPGVSSP APPPVPAPAV 180 GVGGGGGYGM EAIMNAAASG VQFPPVVHMQ NAPGGFGMES QLGFGNRMVP AGAAGQIRAG 240 AGGTGGGSGS GRGKRRAPPV EDVALDKATQ QKQRRMIKNR ESAARSRERK QAYTVELEAL 300 VTQLEEENAR LLKEEADQKK KRFKQLMENL IPVVEQQRPP RVLRRVQSMS WISKKRRSGA 360 GEIA

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MASSKVMSST SPANPDLPRH STSTATTSST CSTSTTGLLQ HSSAVFHPPP PPHQQPQAHH  60
HLLHHSDDHS FGSMNMEEIL KNIYSDPDTL ASAVDGDGSL PAVGAGRNNN VGEVGSKTVD  120
EVWKEIVSGG GAAAGGGGGS HEPRMTLEDF LTKAGAVSEE DVRVPGVSSP APPPVPAPAV  180
GVGGGGGYGM EAIMNAAASG VQFPPVVHMQ NAPGGFGMES QLGFGNRMVP AGAAGQIRAG  240
AGGTGGGSGS GRGKRRAPPV EDVALDKATQ QKQRRMIKNR ESAARSRERK QAYTVELEAL  300
VTQLEEENAR LLKEEADQKK KRFKQLMENL IPVVEQQRPP RVLRRVQSMS WISKKRRSGA  360
GEIA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	318	325	QKKKRFKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03970.1	8e-23	bZIP family protein