PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027108498.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 350aa MW: 37187.3 Da PI: 9.711

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027108498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	66.1	5.9e-21	207	269	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkrerrkq+NRe+ArrsR+RK+ae+eeL++kv++L+aeN +Lk+e+ +l++ +++lk e+ XP_027108498.1 207 ERELKRERRKQSNRESARRSRLRKQAETEELAKKVQSLTAENLSLKSEIHKLTESSERLKLEN 269 89**********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MMSPYGTPYA AIYPHGGVYA HPGVPLGSHA NGHGVLPSPT VTEATAAVPL SLDTPVKSSA 60 NTDKGFTNKL KGFDGLAMSI GNGSSDRAGA GSDHGISQSE DTEGSSDGSN GNTTKVGQNN 120 KKRSREGTPS DAAGEGKNLT PKSPIRTGEV NGTSAKVMGM TVATANEVEK VMGSVLSPNM 180 TSTLELRNPS GGNMKTSPVS EAWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELAKK 240 VQSLTAENLS LKSEIHKLTE SSERLKLENA TMMEKLKNPQ LGQTGNLSLS KFDEMRLQPV 300 GTANLLARVN NSGSVDRNDE EGEVFENTKS GAKLRQLLDA NPRTDAVAAG

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MMSPYGTPYA AIYPHGGVYA HPGVPLGSHA NGHGVLPSPT VTEATAAVPL SLDTPVKSSA  60
NTDKGFTNKL KGFDGLAMSI GNGSSDRAGA GSDHGISQSE DTEGSSDGSN GNTTKVGQNN  120
KKRSREGTPS DAAGEGKNLT PKSPIRTGEV NGTSAKVMGM TVATANEVEK VMGSVLSPNM  180
TSTLELRNPS GGNMKTSPVS EAWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELAKK  240
VQSLTAENLS LKSEIHKLTE SSERLKLENA TMMEKLKNPQ LGQTGNLSLS KFDEMRLQPV  300
GTANLLARVN NSGSVDRNDE EGEVFENTKS GAKLRQLLDA NPRTDAVAAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	224	230	RRSRLRK
2	224	231	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46270.1	2e-88	bZIP family protein