PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027108582.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 475aa MW: 53153.4 Da PI: 6.9613

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027108582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.7	3.9e-52	11	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd++ k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk + XP_027108582.1 11 VPPGFRFHPTEEELLQYYLRKKVAYEKIDL-DVIRDVDLNKLEPWDIQDKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVI 104 69**************************.9***********954444122455******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +s +++ +g++ktLvfykgrap+g+k+dW+mheyrl XP_027108582.1 105 YS-NSRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 139 .9999***************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MRISVNGQSQ VPPGFRFHPT EEELLQYYLR KKVAYEKIDL DVIRDVDLNK LEPWDIQDKC 60 KIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSNSRR IGMRKTLVFY 120 KGRAPHGQKS DWIMHEYRLD DNSTSNNAAE VENVCNAAGE AAAQEEGWVV CRIFKKKNHH 180 IIKSLDHATP FVTTCSIVTT AECTRGPRQR LIGSSDDDDD ERSMEKILEY MGRTCAEERG 240 RDQANQSATP MFPMMPVDIV TKSTGQLCDR FMKLPGLESP KSSPRTTTAC THACYQPITS 300 LQVLPGRGGD DADDVPHDPC IALMSQVNVV NAADHLHSVN TTSTNYRPSE TAAGLSDWAA 360 LDRLVATHLN GQNETAKHLS SCFDGGDHPT DPRAVAAPCC GPPVPDQDLQ LHYQLIRSLS 420 SSASSSDVIN NHHNHSCNNN KRRDYHHDEC ELWSFVRSSL APADPPFSHM PNVRV

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MRISVNGQSQ VPPGFRFHPT EEELLQYYLR KKVAYEKIDL DVIRDVDLNK LEPWDIQDKC  60
KIGSTPQNDW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR DKVIYSNSRR IGMRKTLVFY  120
KGRAPHGQKS DWIMHEYRLD DNSTSNNAAE VENVCNAAGE AAAQEEGWVV CRIFKKKNHH  180
IIKSLDHATP FVTTCSIVTT AECTRGPRQR LIGSSDDDDD ERSMEKILEY MGRTCAEERG  240
RDQANQSATP MFPMMPVDIV TKSTGQLCDR FMKLPGLESP KSSPRTTTAC THACYQPITS  300
LQVLPGRGGD DADDVPHDPC IALMSQVNVV NAADHLHSVN TTSTNYRPSE TAAGLSDWAA  360
LDRLVATHLN GQNETAKHLS SCFDGGDHPT DPRAVAAPCC GPPVPDQDLQ LHYQLIRSLS  420
SSASSSDVIN NHHNHSCNNN KRRDYHHDEC ELWSFVRSSL APADPPFSHM PNVRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-96	NAC family protein