PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027108583.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 470aa MW: 52565.7 Da PI: 6.8707

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027108583.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.1	5.8e-52	11	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd++ ++ +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s XP_027108583.1 11 VPPGFRFHPTEEELLQYYLRKKVAYEKIDL-DVIRDVDLNKLEPWDIQG--STPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYS- 101 69**************************.9***********84..34678**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g++ktLvfykgrap+g+k+dW+mheyrl XP_027108583.1 102 NSRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 134 9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence
MRISVNGQSQ VPPGFRFHPT EEELLQYYLR KKVAYEKIDL DVIRDVDLNK LEPWDIQGST 60 PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY SNSRRIGMRK TLVFYKGRAP 120 HGQKSDWIMH EYRLDDNSTS NNAAEVENVC NAAGEAAAQE EGWVVCRIFK KKNHHIIKSL 180 DHATPFVTTC SIVTTAECTR GPRQRLIGSS DDDDDERSME KILEYMGRTC AEERGRDQAN 240 QSATPMFPMM PVDIVTKSTG QLCDRFMKLP GLESPKSSPR TTTACTHACY QPITSLQVLP 300 GRGGDDADDV PHDPCIALMS QVNVVNAADH LHSVNTTSTN YRPSETAAGL SDWAALDRLV 360 ATHLNGQNET AKHLSSCFDG GDHPTDPRAV AAPCCGPPVP DQDLQLHYQL IRSLSSSASS 420 SDVINNHHNH SCNNNKRRDY HHDECELWSF VRSSLAPADP PFSHMPNVRV

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence

MRISVNGQSQ VPPGFRFHPT EEELLQYYLR KKVAYEKIDL DVIRDVDLNK LEPWDIQGST  60
PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY SNSRRIGMRK TLVFYKGRAP  120
HGQKSDWIMH EYRLDDNSTS NNAAEVENVC NAAGEAAAQE EGWVVCRIFK KKNHHIIKSL  180
DHATPFVTTC SIVTTAECTR GPRQRLIGSS DDDDDERSME KILEYMGRTC AEERGRDQAN  240
QSATPMFPMM PVDIVTKSTG QLCDRFMKLP GLESPKSSPR TTTACTHACY QPITSLQVLP  300
GRGGDDADDV PHDPCIALMS QVNVVNAADH LHSVNTTSTN YRPSETAAGL SDWAALDRLV  360
ATHLNGQNET AKHLSSCFDG GDHPTDPRAV AAPCCGPPVP DQDLQLHYQL IRSLSSSASS  420
SDVINNHHNH SCNNNKRRDY HHDECELWSF VRSSLAPADP PFSHMPNVRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	2e-91	NAC family protein