PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027108618.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Nin-like

Protein Properties

Length: 250aa MW: 27842.8 Da PI: 5.503

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027108618.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82.9	3.1e-26	137	186	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +++++++kyF+ pi++AAkeL+v+lTvLK++CR+++I+RWPhRkiksl XP_027108618.1 137 SALEVDEIQKYFDVPITKAAKELKVGLTVLKKRCRELNIRRWPHRKIKSL 186 67899*******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MNPPALSVVY QLENLLASDG SLYFEEQPPS GAWEQSYLAF PESLGNVQRA YVTDFEDICG 60 DFGWHSPPDV KEPFFEGDVN VVDAKPLNAA GEIRDQALLE NGETVFGEAS GGNAVCSRSS 120 EPLVSDDGLV SGRYKSSALE VDEIQKYFDV PITKAAKELK VGLTVLKKRC RELNIRRWPH 180 RKIKSLKSLI DSAKELGLTS EIEMLEEHKR MLKVLPEMEL TERTKKLRQA CFKANYKKRR 240 AMAAAAAAMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53040.1	2e-41	Nin-like family protein