PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027108942.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 203aa    MW: 22926.6 Da    PI: 7.6703
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027108942.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.6e-18106157256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g ++AeIrd ++  k  r++lg++ t+e+Aa a ++a+ k++g+
  XP_027108942.1 106 RYRGVRRRP-WGTYAAEIRDSKK--KGSRIWLGTYETPEDAALAFDQAAFKMRGA 157
                     7********.**********433..24**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MFGTTIPDSE LALLASIEHH LLNDTDFSDI FPELYSFNDA EVFNSSPSYG SSRDSGEVAL  60
NNREMNNASE DIPFKFGLLG QEEVEQNITA AEVVAPAENV SKDWRRYRGV RRRPWGTYAA  120
EIRDSKKKGS RIWLGTYETP EDAALAFDQA AFKMRGARAR VNFPHLIGSN NVEPARVNPR  180
RRVLEPSFPS SSTARKKCKF QRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.17e-36ERF family protein