PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027109113.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 174aa    MW: 20061.1 Da    PI: 9.4832
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027109113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR171.81.6e-2226113189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                     kfYn+YA ++GFsvrk++ +k  ++g +t r++ C k+g +++ + + +  +rtr+ t+t C+ak+++ + + + k++v++l leHnHel
  XP_027109113.1  26 KFYNKYAFKIGFSVRKDYLNKD-KDGVTTFRRYSCCKKGVKRKYEGD-VMPNRTRVPTKTRCRAKIVIVLFRgTMKYRVHDLILEHNHEL 113
                     6*****************9998.8899***************99999.9999******************999****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MDCSKLTEDG TPELGMEFNS EEDAYKFYNK YAFKIGFSVR KDYLNKDKDG VTTFRRYSCC  60
KKGVKRKYEG DVMPNRTRVP TKTRCRAKIV IVLFRGTMKY RVHDLILEHN HELHIAQCAH  120
MMLSQRKVSV AQGFQAEISE DVGLSLKQSH DLMGKEAGGM GNVGYTRDDL KRYL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.18e-18FAR1 family protein