PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027111022.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 335aa MW: 36054.2 Da PI: 8.0773

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027111022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.8	5.5e-39	69	129	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+alkcprC+s+ntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ XP_027111022.1 69 PEAALKCPRCESANTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 129 67899*****************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MVFSSVPVYL DPPNWPQQQN PQQVAGDGEN SQFPPPLMPP PPPPGAGGTA SIRPGSMAER 60 ARLSKLPQPE AALKCPRCES ANTKFCYFNN YSLTQPRHFC KTCRRYWTRG GALRNVPVGG 120 GCRRNKRSKG SRSKSPMTSD NQSSNSTSTS AVSANNSCST DVMSHLPPPP PLSFFPPLHN 180 LADFSNVDIG MSFGGIHPTV TTRAGAGSEI EFQIGNPLGA GPLNLSSRFA DQWRLQQVQQ 240 LPFLGGLEHS AAAGVYHLEG EVIDQPLGYD GVTTDQLTSK TLEAHGGSVK LEENHQGLNL 300 SRNFLSIPGN DQYWSTTANA WTDLSGSTSS ASHFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	3e-38	Dof family protein