PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027111427.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NF-YB
Protein Properties Length: 149aa    MW: 16908.1 Da    PI: 7.2948
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027111427.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1733.3e-54499297
           NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                    +eqdr+lPianv+rimk++lPanakisk+aket+qec+sefisfvt+easdkc++ekrkt+ngdd++wal++lGf++y+eplk yl+++relege+
  XP_027111427.1  4 KEQDRLLPIANVGRIMKQILPANAKISKEAKETMQECASEFISFVTGEASDKCHKEKRKTVNGDDICWALGSLGFDEYAEPLKRYLNRFRELEGER 99
                    89*******************************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    
MVIKEQDRLL PIANVGRIMK QILPANAKIS KEAKETMQEC ASEFISFVTG EASDKCHKEK  60
RKTVNGDDIC WALGSLGFDE YAEPLKRYLN RFRELEGERA NQNKSGNSEE KVMNQNLAEP  120
RKITTHVSPT SINFNFMDES SNSLSRSCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.11e-63NF-YB family protein