PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027111850.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 197aa    MW: 21757.9 Da    PI: 6.9003
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027111850.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.13e-2060111256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +y+GVr+++ +g+++AeIrd + ng  +r++lg+f taeeAa a+++a+ +++g+
  XP_027111850.1  60 HYRGVRRRP-WGKYAAEIRDSTRNG--TRVWLGTFQTAEEAALAYDRAAFRMRGA 111
                     8********.**********44465..**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MVPYPQAELP LNENDSQEMV LYEVLTEANA ISPSNFPSSR NQASVNKMLH QPSHATGKKH  60
YRGVRRRPWG KYAAEIRDST RNGTRVWLGT FQTAEEAALA YDRAAFRMRG AKALLNFPSE  120
IVTASESSIL RQRVHHNHHA KLNLDRQESN SSSSSTEVSS GTGLGLASFE SENAAGDLSN  180
AESEEYTAAN FSVFQNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.14e-31ERF family protein