PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027112614.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 246aa    MW: 28284.4 Da    PI: 11.3309
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027112614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP267.32.9e-21119169155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++++GVr+++ +grW+AeIrdp++   rkr++lg+++t+eeAa  +++a+ kl+g
  XP_027112614.1 119 KKFRGVRQRP-WGRWAAEIRDPTK---RKRVWLGTYDTPEEAASVYDRAAVKLKG 169
                     59********.**********975...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MEIGISPQSP MYSRQRVKFS EHVVTTNKPI DDRRSLTPSG QSLTVVRQKV VRIIYTDADA  60
TDSSDDEEET RNVRRVKRHV EEINFGPPPK TTKIEQPRNG KRSHQSLTPP AEPDVSSRKK  120
FRGVRQRPWG RWAAEIRDPT KRKRVWLGTY DTPEEAASVY DRAAVKLKGP DAVTNFPVES  180
IKERSVGRVR ATKVVKAPRQ NMSLCRPRQC SVMMMRLVKR RQRFRLELEL ATPFHQPLRF  240
SVAATA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1141168KRKRVWLGTYDTPEEAASVYDRAAVKLK
2216221RLVKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23750.18e-32ERF family protein