PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027113254.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 240aa MW: 27076.4 Da PI: 6.1718

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027113254.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	87.1	2.6e-27	70	158	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 kfY +YA++vGF vr+ + ++s+++g++ r++ C+k+g++ +++ + + +r+r + r gCka++ vk+ek+gkw+vt+++++HnH+l XP_027113254.1 70 KFYIDYARKVGFVVRIMQRRRSETDGRTLARRLGCNKQGFSPNNQGSVASGKRPRCSAREGCKATILVKMEKSGKWVVTRFVKDHNHPL 158 6**************************************************************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MDLDKEDRNR EEENNSEGKE GEDVVGEGNA EELDANDVMD VDGNTGQLKD SEVLEPYVGM 60 EFESEDAARK FYIDYARKVG FVVRIMQRRR SETDGRTLAR RLGCNKQGFS PNNQGSVASG 120 KRPRCSAREG CKATILVKME KSGKWVVTRF VKDHNHPLII SARGVSNGVR FLPNVDKDKK 180 IEQLTLELQR QDQLCTAYRN KLLNFLASVE EQGEHLSSKI NGVIENVKKI EAEIQKSSCH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12850.1	2e-70	FAR1 family protein