PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027113292.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 194aa    MW: 22216.4 Da    PI: 8.4868
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027113292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.71.5e-2676166190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY +Y++++GF+vr++++++s+ n+ ++ ++fvCskeg+re++  +++++    + ++tr gC a+l+v  ++ +kw+vtk+++eHnH+l+
  XP_027113292.1  76 DFYVAYGRQTGFTVRIHHNRRSRINNMVIGQDFVCSKEGFREKKYVQRKDR-VlpPPPVTREGCPAMLRVAFKDGAKWVVTKFVKEHNHSLM 166
                     6******************************************98883322.245899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MDNSTSQVFN SVERKSFLPI DSNGNVFLDD ELSTSMELCI GEDDKCVGQL MAMPLTENLI  60
EPHIGMEFNS RDDARDFYVA YGRQTGFTVR IHHNRRSRIN NMVIGQDFVC SKEGFREKKY  120
VQRKDRVLPP PPVTREGCPA MLRVAFKDGA KWVVTKFVKE HNHSLMSPNK VPWRGCGKNL  180
INQVLSLSLS WTNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-25FAR1 family protein