PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027113305.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 245aa    MW: 27768.4 Da    PI: 7.5012
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027113305.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR185.11.1e-2674163190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY++YA+++GF +r+++ ++s+ +++i +r++ C+k+g+  + k++    r++r++tr gCka++ vk +k+gkw+vt+++++H+H+l+
  XP_027113305.1  74 EFYDDYARHLGFVMRIDQCRRSEVDKRILSRRLSCNKQGYYVKMKDQYGPVRKPRSSTREGCKAMMLVKVNKSGKWVVTRFVKDHTHPLV 163
                     6****************************************9999999****************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
VTVFTPIDNL ATASADRRPW LGGLPDAAQP QTSLDAAAAS VNSSAERQPG ASEEISVQEP  60
YVGMEFDSED AAKEFYDDYA RHLGFVMRID QCRRSEVDKR ILSRRLSCNK QGYYVKMKDQ  120
YGPVRKPRSS TREGCKAMML VKVNKSGKWV VTRFVKDHTH PLVASSRTCR TAMDHKDRKI  180
QELTLELERQ DKLCNLYHEQ IITFLQSVEE ETGLLSTKIE AAVKNVMEME AEAKQQSNLQ  240
QAHLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-70FAR1 family protein