PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027113755.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family bHLH
Protein Properties Length: 253aa    MW: 28642.8 Da    PI: 7.914
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027113755.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.81.7e-1272124155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 
                     +++ h  +ErrRR ++ + ++ Lr llP  +   +++K s ++ L  Av++Ik+++
  XP_027113755.1  72 KKAYHRDIERRRRLEMAELYASLRNLLPLeC---KKTKGSASDHLLDAVNHIKHME 124
                     5788*************************88...********************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
MAVHPDLEPA IPHQDLQNQV VASSLASRQE KTEEIIIRNN INTAPKRQTK ASSAIRPDNH  60
DSGKNPDESK QKKAYHRDIE RRRRLEMAEL YASLRNLLPL ECKKTKGSAS DHLLDAVNHI  120
KHMEKNIREL EVKRDKQINL MAGSSNLDVK IVEETNSSAI KFTLRQCSGG GIEILMKNYL  180
ADTKWFPLSK ILDVLLDEGL AVVSCVCTKV NEEFLYTIQT EANADVDLIC LQEKLTKNVV  240
TGKDLKVLEQ YRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25410.16e-32bHLH family protein