PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027114608.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 269aa    MW: 29324.5 Da    PI: 5.2081
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027114608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-18129180256
             AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+++AeIrd    + k  r++lg+f++ae Aa a+++a+ +++g+
  XP_027114608.1 129 SYRGVRRRP-WGKYAAEIRDsT--R-KGIRVWLGTFDSAEAAALAYDQAAFCMRGP 180
                     69*******.**********32..2.24**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MEANRSLFQF HDTIILDCPF ESSSSFDSPQ PHSFTPSSSS SSLSTSPSSS SWDEVLFQHN  60
CDFLPFNFND SQDMFLFDVL AEGAGASARD ASLRQSSSET NSNSNSSGGG VREEEVTSNV  120
TKETNKEKSY RGVRRRPWGK YAAEIRDSTR KGIRVWLGTF DSAEAAALAY DQAAFCMRGP  180
MAVLNFPVDV VQESLRDMKC GSEGGGGGCS PVVALKQRHS IKKKKSSIRN HKIAREAAAK  240
VENVVILEDL GAEYLEELLN SSSEIPAAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-33ERF family protein