PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027115548.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 471aa MW: 52531.6 Da PI: 6.7832

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027115548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.1	5.8e-52	11	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPt+eel+++yL+kkv+ +k++l +vi++vd++k+ePwd++ ++ +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s XP_027115548.1 11 VPPGFRFHPTEEELLQYYLRKKVAYEKIDL-DVIRDVDLNKLEPWDIQG--STPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYS- 101 69**************************.9***********84..34678**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g++ktLvfykgrap+g+k+dW+mheyrl XP_027115548.1 102 NSRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 134 9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MRISVNGQSQ VPPGFRFHPT EEELLQYYLR KKVAYEKIDL DVIRDVDLNK LEPWDIQGST 60 PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY SNSRRIGMRK TLVFYKGRAP 120 HGQKSDWIMH EYRLDDNSTS NNAAEVENVC NAAAEAAAQE EGGWVVCRIF KKKNHHIIKS 180 LDHATPFVTT CSIVTTAECT RGPRQRLIGS SDDDDDERSL EKILEYMGRT CAEERGRDQA 240 NQSATPMFPM VPVDIVTKST GQLCDRFMKL PGLESPKSSP RTTTTCTHAC YQPITSLQVL 300 PGRGGDDADD VPHDPCIALM SQVNVVNAAD HLHSVNTTST NYRPSETAAG LSDWAALDRL 360 VATHLNGQNE TAKHLSSCFD GGDHPADPRA VAAPCCGPPV PDQDLQLHYQ LIRSLSSSAS 420 SSDVINNHHN HSCNNNKSRD YHHDECELWS FVRSALAPTD PPFSHMPNVR V

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MRISVNGQSQ VPPGFRFHPT EEELLQYYLR KKVAYEKIDL DVIRDVDLNK LEPWDIQGST  60
PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIY SNSRRIGMRK TLVFYKGRAP  120
HGQKSDWIMH EYRLDDNSTS NNAAEVENVC NAAAEAAAQE EGGWVVCRIF KKKNHHIIKS  180
LDHATPFVTT CSIVTTAECT RGPRQRLIGS SDDDDDERSL EKILEYMGRT CAEERGRDQA  240
NQSATPMFPM VPVDIVTKST GQLCDRFMKL PGLESPKSSP RTTTTCTHAC YQPITSLQVL  300
PGRGGDDADD VPHDPCIALM SQVNVVNAAD HLHSVNTTST NYRPSETAAG LSDWAALDRL  360
VATHLNGQNE TAKHLSSCFD GGDHPADPRA VAAPCCGPPV PDQDLQLHYQ LIRSLSSSAS  420
SSDVINNHHN HSCNNNKSRD YHHDECELWS FVRSALAPTD PPFSHMPNVR V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	7e-96	NAC family protein