PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027115754.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 170aa    MW: 18803.6 Da    PI: 9.254
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027115754.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-202576256
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                    +y+GVr+++ +g+++AeIrdp+ +g  +r +lg+f taeeAa+a+++a+ +l+g+
  XP_027115754.1 25 RYRGVRRRP-WGKYAAEIRDPTRQG--ARLWLGTFETAEEAARAYDKAAFNLRGH 76
                    6********.**********96544..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MDGGSSSSRG KGMQGKEEKE KEDVRYRGVR RRPWGKYAAE IRDPTRQGAR LWLGTFETAE  60
EAARAYDKAA FNLRGHLAIL NFPNEYYSQL PSPPHYQPFS SSPSSAFSSS FLSRSSASSS  120
SSGAIQGFDQ RGSSSSSSTG QQKQVIELEY LDDSLLEELL EFGEKKKNGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.11e-30ERF family protein