PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027117505.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 214aa    MW: 24293.2 Da    PI: 5.0513
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027117505.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.22.1e-1889138355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr+++ +g+++AeIrd + ng   r++lg+f++ae Aa a+++a+ +++g
  XP_027117505.1  89 YRGVRRRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEAAALAYDQAAFSMRG 138
                     9*******.**********44465..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MDSTVFFSRI SDFSSDSSFG SVDSFPWDSQ NFHNSLPFNE NDSEEMLLYG LLAQAQAVQE  60
TSEINSSDQI KEEEVSSKPE EKPKKEKAYR GVRRRPWGKF AAEIRDSTRN GIRVWLGTFD  120
SAEAAALAYD QAAFSMRGQA AILNFPVDRV RESLMEMKAT MEDGCSPVVA LKRKHSMRRR  180
NVIRKSKARE VKVENLVVFE DLGNDYLEEL LSTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-68ERF family protein