PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027117758.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bHLH

Protein Properties

Length: 159aa MW: 17446.1 Da PI: 8.2069

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027117758.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.5	1.5e-05	65	97	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++l+ + +K + a++L +A+eYI+ Lq XP_027117758.1 65 EKITALQQLVSPY-----GKTDTASVLLEAMEYIRFLQ 97 6788888888888.....9******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 159 aa Download sequence
MLFHSALGLS DQNLQKGANC EGVMMMEHKR CPVSLDQSSL ASLTPKRHKA DISVLSKEKK 60 EKVGEKITAL QQLVSPYGKT DTASVLLEAM EYIRFLQEQV KVLSAPYLCN TPTTTEQEQE 120 PYSLRSRGLC LVPISCTVGV ASSNGADIWA PIKTASQKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05710.3	9e-58	bHLH family protein