PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027118095.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family ERF
Protein Properties Length: 342aa    MW: 38045.4 Da    PI: 9.3328
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027118095.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-19168216355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+g
  XP_027118095.1 168 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAFAYDTAAYMLRG 216
                     8******9.**********955...5**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MLKGYDAHSL LSGSATFDYF SGSSSAQNTG SHIPLNFLES FPAINEAQLR EPCPSPPSKF  60
PNLGLFLQEP SLMDVSRKAT ESLGKSQKRE PMQLCSQNPL FPISEMGKSQ LLPWLKISQS  120
ITNNSSKGFS DYWLSTTKTT PMKFTGRRIQ NGNQKTSLSS ISSPGKLFRG VRQRHWGKWV  180
AEIRLPRNRT RVWLGTFDTA EEAAFAYDTA AYMLRGDYAH MNFPDLKHQL KANSISCSTA  240
ALLEAKLQAI SQGLPATKKS TELPISQPKS VLHENSRFKS LNIQVPAIKE WPLDLGCKIE  300
SGEMIDIKKS QESLVDTEAV QLSRMPSLDM DTIWDALLVP DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.13e-70ERF family protein