PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027118464.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 158aa MW: 18440.9 Da PI: 7.8257

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027118464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	49.6	1.3e-15	43	133	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fY+ Y+k+vGF++r + ++k ++g+++ +++v +keg+++e+ + ++++++ + tr+gC a+ v ++ gk+ + ++ eHnHela XP_027118464.1 43 EFYSCYSKMVGFNIRDRDQQKD-KHGTVKYKRWVYNKEGFKSEKWLNlEHRKKEAKCLTRVGCLATHGVLWNRgIGKFTIGLFVGEHNHELA 133 6**************99998.66669999********999856677778999*****9999988**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence
MSSEKSLNSE ASINWRAIVD RLDNLSFEDR RLLTFDSIED AKEFYSCYSK MVGFNIRDRD 60 QQKDKHGTVK YKRWVYNKEG FKSEKWLNLE HRKKEAKCLT RVGCLATHGV LWNRGIGKFT 120 IGLFVGEHNH ELAKQDCTIS SIIQDCEETR LESCIIDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-11	FAR1 family protein